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  • BEAGLE https://faculty.washington.edu/browning/beagle/b3.html#beaglev4 cnvHap http://www.imperial.ac.uk/people/l.coin CoNIFER http://conifer.sourceforge.net GEMINI http://faculty.washington.edu/wijsman/software.shtml MORGAN https://www.stat.washington.edu/thompson/Genepi/MORGAN/Morgan.shtml PBAP (Pedigree Based Analysis Pipeline) http://faculty.washington.edu/wijsman/software.shtml PEDSTATS http://csg.sph.umich.edu/abecasis/Pedstats/download/ PennCNV http://penncnv.openbioinformatics.org/en/latest/ PLINK http://pngu.mgh.harvard.edu/~purcell/plink/download.shtml
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