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Here we report VDJtools, a complementary software suite that solves a wide range of T cell receptor (TCR) repertoires post-analysis tasks, provides a detailed tabular output and publication-ready graphics, and is built on top of a flexible API.
VDJtools software and documentation are available at https://github.com/mikessh/vdjtools.
VDJtools can calculate basic immune repertoire statistics that were commonly used in pre-HTS era repertoire analysis.
VDJtools is an open-source software, the source code can be accessed at GitHub [40].
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