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  • IDEPI makes use of open source libraries for machine learning (scikit-learn, scikit-learn.org/), sequence alignment (HMMER, hmmer.janelia.org/), sequence manipulation (BioPython, biopython.org), and parallelization (joblib, pythonhosted.org/joblib), and provides a programming interface which allows users to engineer sequence features and select machine learning algorithms appropriate for their application.
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